Annotated bladder scaffold for pig available for registration of segmented neural anatomical-functional mapping of lower urinary tract (LUT) neural circuit.
Study Purpose: The goal of this work is to create annotated generic pig bladder scaffold for registration of segmented data obtained by experimental groups.
Data Collection: The generic scaffold is created based on the general description of pig bladders from literature.
Primary Conclusion: None stated
Experimental Design: Not applicable.
Completeness: The study is ongoing and potentially will link to other datasets where the data is used for mapping onto the scaffold.
Subjects & Samples: The generic scaffold is not subject/sample specific but represents a generic pig bladder.
Primary vs derivative data: The primary folder contains the mapping tool provenance data file needed to produce the generic pig bladder scaffold. The mapping tool will be accessible from the release download page on the SPARC Portal. The derivative folder contains json files which are used to generate a visualization of the scaffold on the web portal.
Code Availability: https://github.com/ABI-Software/scaffoldmaker (ABI-Software/scaffoldmaker Anatomical scaffold generator using OpenCMISS), https://models.physiomeproject.org/e/871 (scaffold source files).
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