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Jupyter Voila Interactive Data Analysis

Katie Zhuang
,
Million Mulugeta, Ph.D.

Example use of voila - a JupyterLab extension that creates interactive web pages from an iPython Notebook. The example goes through data exploration and analysis of effects of stimulation on colon motility, based on a SPARC dataset.

Updated on September 1, 2021 (Version 1)

Corresponding Contributor:

Katie Zhuang
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Dataset Overview

Example Exploration of a SPARC Dataset using JupyterLab voila on o²S²PARC

This dataset uses SPARC data submitted by Larauche et al. The study consists of a JupyterLab implementing voila, which automatically serves a webpage based on a Jupyter Notebook. The exploratory example shows interactive data plots, images, ipython widgets and explanations of the underlying data studying the effect of electrical stimulation on colon motility.

References

Larauche, M., Wang, Y., Wang, P.-M., Dubrovsky, G., Lo, Y.-K., Hsiang, I., Dunn, J., Liu, W., Tache, Y., & Mulugeta, M. (2021). Influence of direct colon tissue electrical stimulation on colonic motility in anesthetized male Yucatan minipig (Version 3) [Data set]. Pennsieve Discover. https://doi.org/10.26275/HOWG-TBHJ

Larauche, M., Wang, Y., Wang, P., Dubrovsky, G., Lo, Y., Hsiang, E., … Million, M. (2020). The effect of colonic tissue electrical stimulation and celiac branch of the abdominal vagus nerve neuromodulation on colonic motility in anesthetized pigs. Neurogastroenterology & Motility, 32(11). https://doi.org/10.1111/nmo.13925

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Publishing history

September 1, 2021
Originally Published
September 1, 2021 (Version 1)
Last Updated

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