Find and access public scientific datasets.

Dataset to investigate annotations required for visualisation of physiological data on the portal

Annotated mouse brainstem scaffold available for registration of segmented neural anatomical-functional mapping of neural circuits.

Annotated heart scaffold for mouse available for registration of segmented neural anatomical-functional mapping of cardiac neural circuits.

Annotated bladder scaffold for pig available for registration of segmented neural anatomical-functional mapping of lower urinary tract (LUT) neural circuit.

Example use of voila - a JupyterLab extension that creates interactive web pages from an iPython Notebook. The example goes through data exploration and analysis of effects of stimulation on colon motility, based on a SPARC dataset.

Annotated bladder scaffold for mouse available for registration of segmented neural anatomical-functional mapping of lower urinary tract (LUT) neural circuits.

This study aims to evaluate the effects of cervical VNS on gastric motility in rats. Gastric MRI was performed during cervical VNS with and without afferent blockade at the nodose ganglion.

Molecular genetic techniques in the autonomic nervous system

The generated body scaffold was fitted to data and the organ fiducial markers were embedded in the mouse whole-body. The landmarks were obtained from segmenting MRI data and also were defined in the body scaffold.

Annotated mouse stomach scaffold available for registration of segmented neural anatomical-functional mapping of enteric neural circuits.

Single intrinsic cardiac nervous system (ICN) neurons were marked in an image volume of heart sections that was anatomically delineated for the 3D reconstruction of the whole heart with mapped locations of individual ICN neurons.

This dataset establishes dissection and clearing techniques for kidney- and liver-innervating ganglia

Immunohistochemistry micrographs of human vagus nerves labeled with anti-claudin-1. Binary traces from segmentation to quantify effective nerve diameter, effective fascicle diameter, number of fascicles, and perineurium thickness.

Animal study to determine the electrode configurations that promote functional gains in the storage and voiding phases of lower urinary tract function as a result of activation of spinal circuits with spinal cord epidural stimulation in injured spine.

Vagus Nerve Stimulation evoked vagus nerve compound action potential and neck muscle electromyography data

Growth-Associated Protein 43 (GAP43), tyrosine hydroxylase (TH) staining for LA, RA, LV, RV in dogs after 2 months of subcutaneous nerve stimulation (0, 0.25, 1.5, 2.5, and 3.5 mA)

Confocal image projection of enteric ganglia in a male mouse

Single cell RNA sequencing of the pig colon

Measurement of compartmentalized cAMP responses to beta-adrenergic and muscarinic stimulation using FRET-based biosensors.

List of antibodies that were tested in the mouse colon. Information on source, species, dilution, and whether the test was performed on whole colonic wall with CLARITY, or whole mount preparations of submucusal and myenteric plexus.

Example JupyterLab environment used to compile, run and display results of neural computational models, based on a SPARC dataset (https://doi.org/10.26275/iiwv-k07f)

CellML version of the Fabbri et al. 2017 human sinoatrial node (SAN) cell model and an ODE-based version of the Gerstner & Kistler 2002 brain stem model combined to demonstrate the effect of brain stem activity on heart rate

The generated body scaffold was fitted to data and the organ fiducial markers were embedded in the human whole-body. The landmarks were obtained from image data and also were defined in the body scaffold.

Annotated heart scaffold for rat available for registration of segmented neural anatomical-functional mapping of cardiac neural circuits.

Annotated rat brainstem scaffold available for registration of segmented neural anatomical-functional mapping of neural circuits.