Study Purpose: The goal of this work is to create annotated generic cat bladder scaffold for registration of segmented data obtained by experimental groups.
Data Collection: The generic scaffold is created based on the general description of cat bladders from literature.
Primary Conclusion: None stated
Experimental Design: Not applicable.
Completeness: The study is ongoing and potentially will link to other datasets where the data is used for mapping onto the scaffold.
Subjects & Samples: The generic scaffold is not subject/sample specific but represents a generic cat bladder.
Primary vs derivative data: The primary folder contains the mapping tool provenance data file needed to produce the generic cat bladder scaffold. The mapping tool will be accessible from the release download page on the SPARC Portal. The derivative folder contains json files which are used to generate a visualization of the scaffold on the web portal.
Code Availability: https://github.com/ABI-Software/scaffoldmaker (ABI-Software/scaffoldmaker Anatomical scaffold generator using OpenCMISS), https://models.physiomeproject.org/e/879 (scaffold source files).
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