Pennsieve Discover

Triaxial mechanical testing of dog colon segments

Measurement data related to the mechanical testing of dog colon samples under triaxial (inflation, extension, torsion) loading.

46 Files

3.1 MB

29 Records

Dataset will be released on September 1, 2021

force, inflation, pressure + More

Test case for physiological data visualisation

Database to test out file requirements for time series visualisation

22 Files

31.05 MB

No Records

Mabelle Lin updated on May 14, 2021

physiological data, time series

TRAP-SEQ (Translating Ribosome Affinity Purification followed by RNA sequencing) of iBAT-related ganglia from 7-day cold and warm treated mice

Molecular-genetic techniques in the autonomic nervous system: Projection-specific tracing and ribosomal RNA pulldown

51 Files

22.68 GB

13 Records

Heike Muenzberg updated on May 13, 2021

gene expression, ganglion, cold treatment + More

RNA sequencing reveals novel transcripts from sympathetic stellate ganglia during cardiac sympathetic hyperactivity in rats

Stellate ganglia of 15-16 week old Wistar and Spontaneously Hypertensive Rats were analyzed by: RNA-sequencing, differential analysis, and gene ontology analysis. Data were analyzed by a pipeline consisting of Salmon, DESeq2, and clusterprofiler.

27 Files

3.3 MB

25 Records

scott john updated on May 13, 2021

differential expression, rna-sequencing, stellate ganglia + More

Tool for uploading files to Blackfynn

Upload_bfynn aids with file uploads to Blackfynn. Users create a csv file with folders and names that meet the BIDS-like standards and lists the sources of files to be uploaded into these folders. Local filenames and folder structures are not changed.

100 Files

37.14 MB

6 Records

Kendall Morris updated on May 12, 2021

software, neural circuits, spike trains + More

Acquisition of single neurons and regional neuronal samples from the porcine Right Atrial Ganglionic Plexus (RAGP) through Laser Capture Microdissection

Transcriptional Diversity of Single Neurons in the Porcine RAGP.High throughput qPCR data for over 400 single neurons assayed for hundreds of genes across 4 pig RAGP

11,073 Files

7.32 GB

2 Records

Alison Moss updated on May 14, 2021

sparc, ragp, lcm + More

Generic rat stomach scaffold

Annotated rat stomach scaffold available for registration of segmented neural anatomical-functional mapping of enteric neural circuits.

38 Files

5.66 MB

6 Records

Mabelle Lin updated on May 10, 2021

myenteric plexus, stomach, rat

Generic human stomach scaffold

Annotated human stomach scaffold available for registration of segmented neural anatomical-functional mapping of enteric neural circuits.

28 Files

5.21 MB

No Records

Mabelle Lin updated on May 10, 2021

stomach, human, myenteric plexus

Computational analysis of the human sinus node action potential - Model development and effects of mutations

CellML version of the Fabbri et al. 2017 model

16 Files

149.05 KB

4 Records

Alan Garny updated on May 10, 2021

cardiovascular models, ion channels, sinoatrial node + More

Human whole-body scaffold

Annotated human whole-body scaffold (abdomen, diaphragm, thorax, neck, head, skin, spinal cord) with embedded vagus nerves.

30 Files

8.87 MB

No Records

Elias Soltani updated on May 7, 2021

whole-body, human, torso + More

Retrograde tracing of interscapular brown adipose tissue (iBAT) specific sympathetic neurons in mice - virus and reporter testing

Document and analyze the efficiency of retrograde viral transport amongst different viral constructs and mouse models

21 Files

268.47 KB

6 Records

Heike Muenzberg updated on May 7, 2021

cav2, ibat, sympathetic chain ganglia + More

Acute wired Urological Monitor of Conscious Activity (UroMOCA) implantation in feline bladder

Testing of a bladder sensor device

849 Files

1.31 GB

16 Records

Dataset will be released on July 1, 2021

cat, uromoca, urodynamics + More

Gene expression profile of interscapular brown adipose tissue (iBAT) and inguinal white adipose tissue (iWAT) whole ganglia sequencing in mice

Identification of the gene expression profile of interscapular brown fat (iBAT)-related ganglia (SG/T1 & T3) and inguinal white fat (iWAT)-related ganglia (T13/L1 & L2).

65 Files

19.16 GB

55 Records

Heike Muenzberg updated on May 5, 2021

inguinal white fat (iwat), l2, gene expression + More

Acute wired ColoMOCA implantation in pig bowel

Testing of wired bowel sensor devices

73 Files

12.21 MB

17 Records

Dataset will be released on July 1, 2021

wireless, pig, colomoca + More

Functional mapping with lumbosacral epidural stimulation for restoration of bladder function after spinal cord injury in rats

Animal study to determine the electrode configurations that promote functional gains in the storage and voiding phases of lower urinary tract function as a result of activation of spinal circuits with spinal cord epidural stimulation in injured spine.

66 Files

54.86 GB

99 Records

Fahmi Khalifa updated on May 3, 2021

epidural stimulation, urogenital, bladder + More

Chemogenetic whole-body and iBAT (interscapular brown adipose tissue) -specific sympathetic stimulation in anesthetized mice

Functional effects of whole-body and iBAT-specific stimulation while under acute anesthesia

21 Files

326.29 KB

6 Records

Heike Muenzberg updated on April 12, 2021

aav, sympathetic, chemogenetics + More

Chemogenetic iBAT (interscapular brown adipose tissue)-specific sympathetic stimulation and e-mitter implant in mice

Chemogenetic iBAT-specific sympathetic stimulation and e-mitter implant

33 Files

1.24 MB

16 Records

Heike Muenzberg updated on April 12, 2021

thermogenesis, sympathetic, ibat + More

Optogenetic activation of nitrergic and cholinergic neurons of murine colonic myenteric plexus

Tension recordings of proximal, middle and distal colon after optogenetic activation of nitrergic and cholinergic myenteric neurons

46 Files

138.27 MB

31 Records

Dataset will be released on May 31, 2021

myenteric plexus, cholinergic, nitrergic + More

Characterization of projections of longitudinal muscle motor neurons in human colon

DiI-retrograde tracing ex vivo plus immunohistochemistry to characterise Longitudinal muscle motor neurons

1,736 Files

3.05 GB

73 Records

Simon Brookes updated on April 11, 2021

smooth muscle, motor neuron, human + More

In Vitro Imaging of Mechanosensitive Submucous Neurons in the Porcine Colon

This dataset is about electrophysiological experiment on porcine colonic submucosal enteric neurons. The neurons were challenged with 2 different mechanical stimuli (compression and stretch). Neuronal responses to the stimuli were recorded and analyzed.

73 Files

22.81 MB

115 Records

Gemma Mazzuoli-Weber updated on April 11, 2021

immunohistochemistry, voltage sensitive dye, ultrafast neuroimaging technique + More

Functional mapping of the stomach neural circuitry - GES-evoked duodenal motility in rats is stimulation site dependent

Functional mapping of the stomach’s neural circuitry: GES-evoked duodenal motility in rats is stimulation site dependent.

181 Files

2.45 GB

237 Records

Terry Powley updated on April 11, 2021

mapping, motility, stomach + More

MicroCT imaging of rat stomach vasculature with Microfil MV-122

The stomach vasculature was filled at perfusion with a lead-containing silicone-based curable fluid (Microfil MV-122). Once the contrast medium was cured, the stomach was removed and fixed and subsequently imaged via microCT.

203 Files

10.32 GB

67 Records

Terry Powley updated on April 11, 2021

micro-ct, stomach, vasculature + More

Chronic wireless Urological Monitor of Conscious Activity (UroMOCA) implantation in feline bladder

Recording bladder function in ambulatory cats using an implanted, wireless device

3,258 Files

2.58 GB

24 Records

Margot Damaser updated on April 10, 2021

pressure, bladder, wireless + More

Transcriptional Diversity of Single Neurons in the Porcine Right Atrial Ganglionic Plexus (RAGP)

Single neurons were collected from 4 different porcine RAGP through Laser Capture Microdissection (LCM) and subjected to HT-qPCR to assay for expression of over 200 genes.

3,667 Files

46.53 GB

431 Records

Alison Moss updated on April 10, 2021

ht-qpcr, single neurons, ragp

Spatially Tracked Single-Neuron Transcriptomics of a Male Porcine Right Atrial Ganglionic Plexus (RAGP)

Single neurons and regional neuronal samples were collected from a male porcine RAGP through Laser Capture Microdissection with preserved spatial tracking.

23 Files

125.37 MB

95 Records

Alison Moss updated on April 10, 2021

single neurons, spatial tracking, 3d ragp

Find and access public scientific datasets.

Status

Tags

Triaxial mechanical testing of dog colon segments

Test case for physiological data visualisation

TRAP-SEQ (Translating Ribosome Affinity Purification followed by RNA sequencing) of iBAT-related ganglia from 7-day cold and warm treated mice

RNA sequencing reveals novel transcripts from sympathetic stellate ganglia during cardiac sympathetic hyperactivity in rats

Tool for uploading files to Blackfynn

Acquisition of single neurons and regional neuronal samples from the porcine Right Atrial Ganglionic Plexus (RAGP) through Laser Capture Microdissection

Generic rat stomach scaffold

Generic human stomach scaffold

Computational analysis of the human sinus node action potential - Model development and effects of mutations

Human whole-body scaffold

Retrograde tracing of interscapular brown adipose tissue (iBAT) specific sympathetic neurons in mice - virus and reporter testing

Acute wired Urological Monitor of Conscious Activity (UroMOCA) implantation in feline bladder

Gene expression profile of interscapular brown adipose tissue (iBAT) and inguinal white adipose tissue (iWAT) whole ganglia sequencing in mice

Acute wired ColoMOCA implantation in pig bowel

Functional mapping with lumbosacral epidural stimulation for restoration of bladder function after spinal cord injury in rats

Chemogenetic whole-body and iBAT (interscapular brown adipose tissue) -specific sympathetic stimulation in anesthetized mice

Chemogenetic iBAT (interscapular brown adipose tissue)-specific sympathetic stimulation and e-mitter implant in mice

Optogenetic activation of nitrergic and cholinergic neurons of murine colonic myenteric plexus

Characterization of projections of longitudinal muscle motor neurons in human colon

In Vitro Imaging of Mechanosensitive Submucous Neurons in the Porcine Colon

Functional mapping of the stomach neural circuitry - GES-evoked duodenal motility in rats is stimulation site dependent

MicroCT imaging of rat stomach vasculature with Microfil MV-122

Chronic wireless Urological Monitor of Conscious Activity (UroMOCA) implantation in feline bladder

Transcriptional Diversity of Single Neurons in the Porcine Right Atrial Ganglionic Plexus (RAGP)

Spatially Tracked Single-Neuron Transcriptomics of a Male Porcine Right Atrial Ganglionic Plexus (RAGP)

This dataset is no longer available on Discover.